Mary E. Delany, Ph.D.

Mary Delany

Position Title
Professor Emerita

Bio

Positions

  • Professor Emerita, 2020 - present
  • Professor, Developmental Genetics, 1995-2020
  • Executive Associate Dean, College of Agricultural and Environmental Sciences, 2014-2019
  • Interim Dean, College of Agricultural and Environmental Sciences 2012-2014
  • Associate Dean, College of Agricultural and Environmental Sciences 2009-2012
  • Chair, Animal Science 2005-2009

Honors

  • 2015: Fellow, Poultry Science Association http://www.poultryscience.org/awards.asp
  • 2012: Fellow, American Association for the Advancement of Science (AAAS)
  • 2009-2016: John and Joan Fiddyment Endowed Chair in Agriculture

Education

  • B.A., Montclair State College, Montclair NJ, 1979.
  • M.S., Cornell University, Ithaca NY, 1984.
  • Ph.D., Cornell University, Ithaca NY, 1987.

Research Interests

Topics: Chromosome organization, telomere biology, herpesvirus-host genome interactions, developmental mutations, conservation of genetic resources

In my laboratory we studied the domestic chicken (Gallus domesticus). The chicken is an important source of protein (meat and eggs) for people around the globe. Research on the chicken is important because of its agricultural significance and because it serves as an excellent animal model in many fields, e.g., for human diseases, developmental biology and comparative vertebrate biology.

Students studying in the lab (M.S. and Ph.D.) were trained in the disciplines of genetics, cytogenetics, and genomics with an emphasis on avian systems as well as comparative vertebrate biology. Research and technology levels ranged from molecular and cellular to the organismal.

Chromosome Organization.

In order to explore and better understand chromosome organization of chicken, turkey and quail we employed molecular cytogenetics to study chromosome architecture, gene and gene complex order, and the mapping of coding and repetitive non-coding elements. Studies included in depth analysis of individual chromosomes (e.g, GGA16 and GGA17) to comparative analysis among poultry genomes and specialized resources (in vitro cell lines).

Telomere Biology

Telomere stability is one of the most significant genetic mechanisms controlling overall genome stability and influencing cellular proliferation, senescence and transformation. Our work focused on the organization, inheritance, regulation and stability of telomere array organization in normal, immortalized and transformed cell systems of the chicken.

Host-Herpesvirus Genome Interactions

Projects included the regulation and function of the telomere-telomerase pathway during transformation and tumorigenesis caused by Marek’s disease virus (MDV), a DNA herpes virus which induces T-cell lymphomas and results in a high level of mortality. This particular disease is a problem of enormous significance for the poultry industry. MDV infection and disease in chickens also serves as a model system for human herpes virus infection and disease conditions (e.g., Burkitt’s lymphoma caused by Epstein Barr virus). We determined that the MDV integrates into the telomeres of the chicken genome randomly and ubiquitously during early infection and then during latency and oncogenesis wherein the further selective mechanisms streamline those lineages leading to the oncogenic tumorigenic condition of the disease.

Developmental Mutations

Another main research area included the mapping, sequencing and analysis of priority candidate regions to discover the elements causative of inherited mutations of the face (e.g., cleft palate) and limbs (wingless). Such studies contributed new knowledge of key developmental pathways in chicken and serve as models for human development and comparative vertebrate biology.

Conservation of Research Genetic Resources

All of our work employed specialized genetic resources (inbred and congenic inbred lines of chicken (living stocks); in vitro cell lines) that were developed by geneticists working with poultry since the 1950s and maintained at UC Davis, Cornell University (Ithaca, NY) and the USDA-ARS Avian Disease and Oncology Laboratory (E. Lansing, MI). Prior researchers maintained, characterized these lines as well as explored important biological questions relative to poultry and vertebrate biological mechanisms. We were able to further the state of fundamental knowledge in the areas outlined above utilizing these important resources. A key issue that has yet to be resolved is how to maintain such irreplaceable resources in the face of financial issues and staffing/space pressures for Agricultural Experiment Stations at the land grant institutions.

Graduate Groups

Courses Taught

  • Integrated Animal Biology (ABG 200B)
  • Animal Cytogenetics (ANG 101)
  • Avian Development and Genetics (AVS 103)
  • Teaching in the Davis Honors Challenge Program: http://honors.ucdavis.edu/html/
    • HNR 94  Honors Seminar 2005: Medical Marijuana: Truth or Dare for a Healthy Society?
    • HNR 94 Honors Seminar 2004: Games Academic Institutions Play: How Should They?
    • HNR 94 Honors Seminar 2003: The Science of Kissing

People

A full list of lab members.

Selected Publications

Glass, M.C., Smith, J.M., Cheng, H.H., M.E. Delany. 2021. Marek’s disease virus telomeric integration profiles of neoplastic host tissues reveal unbiased chromosomal selection and loss of cellular diversity during tumorigenesis. Genes 12(10):1630. https://doi.org/10.3390/genes12101630

Kern, C., Y. Wang, X. Xu, Z. Pan, M. Halstead, G. Chanthavixay, P. Saelao, S. Waters, R. Xiang, A. Chamberlain, I. Korf, M.E. Delany, H.H. Cheng, J.F. Medrano, A.L. Van Eenennaam, C.K. Tuggle, C.Ernst, P. Flicek, G. Quon, P. Ross, H. Zhou. 2021. Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research. Nature Communications 12, 1821. https://doi.org/10.1038/s41467-021-22100-8

Owen. J.R, Hennig, S.L., McNabb, B.R., Mansour, T.A., Smith, J.M., J. C. Lin, Young, A.E, Trott, J.F.,  Murray, J.D., Delany, M.E., Ross, P.J., and A.L. Van Eenennaam. 2021. One-step generation of a targeted knock-in calf using the CRISPR-Cas9 system in bovine zygotes. BMC Genomics 22, 118, 11pp.  https://doi.org/10.1186/s12864-021-07418-3

Halstead, M., Kern, C., Saelao, P., Chanthavixay, G., Wang, Y., Delany, M., Zhou, H., and P. Ross. 2020 Sci Rep 10, 5230. https://doi.org/10.1038/s41598-020-61678-9

Youngworth, I. and M.E. Delany. 2020. Mapping of the chicken cleft primary palate mutation on chromosome 11 and sequencing of the 4.9 Mb linked region. Animal Genetics 51:423-429. https://onlinelibrary.wiley.com/doi/abs/10.1111/age.12927

Youngworth, I., and M.E. Delany. 2019. A premature stop codon in RAF1 is the priority candidate causative mutation of the inherited chicken wingless-2 developmental syndrome Genes 10, 353 (15p).  https://www.mdpi.com/2073-4425/10/5/353/pdf

O’Hare, E.A., Antin, P., and M.E. Delany. 2019.  Two proximally-close priority candidate genes for diplopodia-1, an autosomal inherited craniofacial-limb syndrome in the chicken:  MRE11 and GPR83. J. Heredity 110(2):194-210. https://doi.org/10.1093/jhered/esy071

Kern, C., Y. Wang, J. Chitwood, Korf, I., Delany, M., H. Chen, J.F. Medrano, A.L. Van Eenennaam, C. Ernst,  P. Ross, and H. Zhou.  2018. Genome-wide Identification of Tissue-Specific Long Non-Coding RNA in Three Farm Animal Species. BMC Genomics 19:684.

https://bmcgenomics.biomedcentral.com/track/pdf/10.1186/s12864-018-5037-7

McPherson, M.C., H.H Cheng, J.M. Smith, and M.E. Delany2018 Vaccination and host Marek’s disease-resistance genotype significantly reduce oncogenic Gallid alphaherpesvirus 2 telomere integration in host birds. Cytogenetics and Genome Research 156:204-214.  https://www.karger.com/Article/FullText/495174

Webb, A., Youngworth, I., M. Kaya, C.L. Gitter, E.A. O’Hare, B.P. May, H.H. Cheng, and M.E. Delany. 2018. The wingless-2 mutation maps to a 227 kb region on chicken chromosome 12. Poultry Science 97:1872-1880. https://academic.oup.com/ps/article/97/6/1872/4942542

McPherson, M.C., H.H Cheng, and M.E. Delany. 2016. Marek’s disease herpesvirus vaccines integrate into chicken host chromosomes yet lack a virus-host phenotype associated with oncogenic transformation. Vaccine 34:5554-5561

http://dx.doi.org/10.1016/j.vaccine.2016.09.051  

Highlighted article November 2016: http://www.journals.elsevier.com/vaccine/highlighted-articles/highlighted-article-november-2016

Tuggle, C.K. E. Giuffra, S. N. White, L Clarke, H. Zhou, P. J. Ross, H. Acloque, J. M. Reecy, A. Archibald, R. Bellone, M. Boichard , A. Chamberlain, H. Cheng, R. P.M.A. Crooijmans, M. E. Delany, C.J. Finno, M. A. M. Groenen, B. Hayes, J. K. Lunney, J.L. Petersen, G. S. Plastow, C. J. Schmidt , J. Song, M. Watson. 2016. GO-FAANG meeting: a Gathering On Functional Annotation of Animal Genomes. Animal Genetics 47(5): 528-533. http://onlinelibrary.wiley.com/doi/10.1111/age.12466/abstract

McPherson, M.C., and M.E. Delany. 2016. Virus and host genomic, molecular and cellular interactions during Marek’s disease pathogenesis and oncogenesis. Poultry Science 95:412-429. http://ps.oxfordjournals.org/content/early/2016/01/14/ps.pev369.full.pdf?papetoc

Schock, E.N., C.F. Chang, I. Youngworth, M. Davey, M.E. Delany, and S.A. Brugmann. 2016. Utilizing the chicken as an animal model for human craniofacial ciliopathies. Developmental Biology 45(2):326-337. http://dx.doi.org/10.1016/j.ydbio.2015.10.024  (PMID: 26597494)

May, B.P. and M.E. Delany. 2015. Meiotic models to explain classical-linkage, pseudolinkage, and chromosomal pairing in tetraploid derivative salmonid genomes: II. Wright is still right. J. Heredity 1-5. E-version August 29, 2015 http://jhered.oxfordjournals.org/content/early/2015/08/28/jhered.esv056.full.pdf+html

Schock, E.N., C. F. Chang, J. N. Struve, Y.T. Chang, J. Chang, M. E. Delany and S.A. Brugmann. 2015. Using the avian mutant talpid2 as a disease model for understanding the oral-facial phenotypes of Oral-facial-digital syndrome. Disease Models and Mechanisms 8:855-866. http://dmm.biologists.org/content/8/8/855.full.pdf+html (Highlighted in F1000; PMID: 26044959)

Schmid, M., J. Smith, D.W. Burt, B.L. Aken, P.B. Antin, A.L. Archibald, C. Ashwell, P.J. Blackshear, C. Boschiero, C.T. Brown, S.C. Burgess, H.H. Cheng, W. Chow, Coble D.J., A. Cooksey, R.P.M.A. Crooijmans, J. Damas, R.V.N. Davis, D.-J. de Koning D., Delany M.E., T. Derrien, T.T. Desta, I.C. Dunn, M. Dunn, H. Ellegren, L. Eöry, I.k. Erb, M. Farré, M. Fasold, D. Fleming, P. Flicek, K.E. Fowler, L. Frésard, D.P. Froman, V. Garceau, P.P. Gardner, A.A. Gheyas, D.K. Griffin, M.A.M. Groenen, T. Haaf, O. Hanotte, A. Hart, J. Häsler, S.B. Hedges S.B., J. Hertel, K. Howe, A. Hubbard, D.A. Hume D.A., P. Kaiser, D. Kedra, S.J. Kemp, C. Klopp, K.E. Kniel K.E., R. Kuo, S. Lagarrigue, S.J. Lamont S.J., D.M. Larkin, R.A. Lawal, S.M. Markland, F. McCarthy, H.A. McCormack, M.C. McPherson, A. Motegi, S.A. Muljo, A. Münsterberg, R. Nag, I. Nanda, M. Neuberger, A. Nitsche, C. Notredame, H. Noyes, R. O'Connor, E.A. O'Hare, A.J. Oler, S.C. Ommeh, H. Pais, M. Persia, F. Pitel, L. Preeyanon, B.P. Prieto, P. Barja, E. M. Pritchett, D.D. Rhoads, C. Robinson, M.N. Romanov, M. Rothschild, P.-F. Roux, C.J. Schmidt, A.-S. Schneider, M.G. Schwartz, S.M. Searle, M.S. Skinner, C.A. Smith, P.F. Stadler, T.E. Steeves, C. Steinlein, L. Sun, M. Takata, I. Ulitsky, W. Wang, Y. Wang, W.C. Warren, J.M.D. Wood, D. Wragg, and H. Zhou. 2015. Third report on chicken genes and chromosomes 2015. Cytogenetics and Genome Research. 145(2):78-179. Two sections written by the Delany Laboratory: Treasure the Exceptions: Utilizing Chicken Mutant Lines and Advanced Genetic Technologies to Uncover Genes Involved in Developmental Processes (O’Hare and Delany, p.137-141); Host-Viral Genome Interactions in Marek’s Disease (McPherson, Robinson and Delany, p.148-154).

Robinson, C.M., H.H. Cheng, and M.E. Delany. 2014. Marek’s disease virus and chicken host genome interactions. Viral genome integration occurs early post-infection and over a timeframe associated with latency, yet integration alone is not sufficient for cellular transformation. Cytogenetic and Genome Research 144:142-154.

S Chang, C-F.; Schock, E.N.; O'Hare (formerly Robb), E.A., Dodgson, J.B., Cheng, H.H., Muir, W.M., Edelman, R.E., Delany, M.E., S. A Brugmann. 2014. The cellular and molecular etiology of the craniofacial defects in the avian ciliopathic mutant, talpid2. Development 141:3003-12.
** Recommended by the Faculty of 1000 (
http://f1000.com/prime/718507249 , F1000Prime Recommendations, Dissents and Comments for [Chang CF et al., Development 2014, 141(15):3003-12]. In F1000Prime, 12 Aug 2014; F1000Prime.com/718507249 )

McPherson, M.C., L. Gehlen, C.M. Robinson, and M. E. Delany. 2014. Comparative cytogenomics of poultry: mapping of single genes and repeat loci in the Japanese quail (Coturnix japonica) Chromosome Research 22:71-83. DOI: 10.1007/s10577-014-9411-2 http://link.springer.com/article/10.1007/s10577-014-9411-2

Miller, M.M., C.M. Robinson, J. Abernathy, R.M. Goto, M. Hamilton, H. Zhou, and M.E. Delany. 2014. Mapping of genes for olfactory receptors, cysteine-rich-domain containing scavenger receptors and other proteins to GGA 16, the chicken MHC microchromosome. J Heredity. 105:203-215. doi:10.1093/jhered/est091

 Delany, M.E. and T.H. O’Hare. 2013. Genetic stocks for immunological research (Appendix I). In Avian Immunology, 2nd Edition (editors: K.A. Schat, B. Kaspers and P. Kaiser). Elsevier: Academic Press, San Diego, CA. ISBN 9780123969651. 456 pp.

 Robb, E.A., P. Antin, and M.E. Delany. 2013. Defining the sequence elements and candidate genes for the coloboma mutation. PLoS One 8(4):e60267.
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0060267

 Robb, E.A., and M.E. Delany. 2012. Case study of sequence capture enrichment technology: Identification of variation underpinning developmental syndromes in an amniote model. Genes. 3:233-247 doi:10.3390/genes3020233
http://www.mdpi.com/2073-4425/3/2/233/

Robb, E., and M.E. Delany. 2012. Polydactyly in an avian biomedical model: A genetic study of pre-axial variation and genomic maintenance. Cytogenetic and Genome Research 136:50-68.

Reed, K.M., M. Bauer, M. S. Monson, L. D. Chaves, B. Benoit, T.H. O’Hare and M.E. Delany. 2011. Defining the turkey MHC: Identification of expressed Class I and Class IIB genes independent of the B-locus. Immunogenetics 63:753-771 DOI 10.1007/s00251-011-0549-1

O’Hare, T.H., and M.E. Delany. 2011. Molecular and cellular evidence for the alternate lengthening of telomeres (ALT) maintenance pathway in chicken. Cytogenetic and Genome Research 135(1):65-78. http://content.karger.com/ProdukteDB/produkte.aspDOI=10.1159/000330125

Zhang, Y., X. Zhang, T.H. O’Hare, B. Payne, J.J. Dong, C.F. Scheuring, M. Zhang, J.J. Huang, M.-K. Lee, M.E. Delany, H.-B. Zhang and J.B. Dodgson. 2011. A comparative physical map reveals the pattern of chromosomal evolution between the turkey (Meleagris gallopavo) and chicken (Gallus gallus) genomes. BMC Genomics. 12:447. http://www.biomedcentral.com/content/pdf/1471-2164-12-447.pdf

Dodgson, J.B., M.E. Delany and H. Chang. 2011. Poultry genome sequences: Progress and outstanding challenges. Cytogenetic and Genome Research 134(1):19-26.

Robb, E.A., C.L. Gitter, H. Cheng and M.E. Delany. 2011. Single nucleotide polymorphism analysis of chicken genetic resources: Variation within and among MHC-congenic lines and mapping of developmental mutations. J. Heredity 102:141-156. (cover art)

Robinson, C.M., H. Hunt, H. Cheng and M.E. Delany. 2010. Chromosomal integration of an avian oncogenic herpesvirus reveals telomeric preferences and evidence for lymphoma clonality. Herpesviridae 1:5 (7 Dec 2010)http://www.herpesviridae.org/content/1/1/5

Dalloul, R.A, J. A. Long, A. V. Zimin, L. Aslam, K. Beal, L. Blomberg, P. Bouffard, D. W. Burt, O. Crasta, R.P.M.A. Crooijmans, K. Cooper, R. A. Coulombe, S. De, M. E.Delany, J. B. Dodgson, J. J. Dong , C. Evans, P. Flicek, L. Florea, O. Folkerts, K. Fredrikson, M.A.M. Groenen, T.T. Harkins, J. Herrero, S. Hoffmann, H.-J. Megens, A. Jiang, P. de Jong, P. Kaiser, H. Kim, K.-W. Kim, S. Kim, D. Langenberger, M.-K. Lee, T. Lee, S. Mane, G. Marcais, M. Marz, A. P. McElroy, T. Modise, M. Nefedov, C. Notredame, I. R. Paton, W. S. Payne, G. Pertea, D. Prickett, D. Puiu, D. Qioa, E. Raineri, M. Ruffier, S. L. Salzberg, M. C. Schatz, C. Scheuring, C. J. Schmidt, S. Schroeder, S. Searle, E. J. Smith, J. Smith, T. S. Sonstegard, P. F. Stadler, H. Tafer, Z. Tu, C. P. Van Tassell, A. J. Vilella, K. Williams, J. A. Yorke, L. Zhang, H.-B. Zhang, X. Zhang, Y. Zhang, and K. M. Reed. 2010. Multi-platform next generation sequencing of the domestic turkey (Meleagris gallopavo): Genome assembly and analysis. PLoS Biology 8(9) e1000475. doi:10.1371/journal.pbio.1000475http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.1000475

Swanberg, S.E., T.H. O’Hare, E.A. Robb, C.M. Robinson, H. Chang, and M.E.Delany. 2010. Telomere biology of the chicken: A model for aging research. Exptl Gerontology. 45:647-654.

Delany, M.E., C.M. Robinson, R. M. Goto and M. M. Miller.  2009. Architecture and organization of chicken microchromosome 16: Order of the NOR, MHC-Y and MHC-B subregions. J. Heredity 100:507-514. (cover art)

O’Hare, T.H., and M.E. Delany. 2009. Genetic variation exists for telomeric array organization within and among the genomes of normal, immortalized, and transformed chicken systems. Chromosome Research 17:947-964.

Owen, J., M.E. Delany, C. Cardona, A. Bickford, and B.A. Mullens. 2009. Host inflammatory response governs fitness in an avian cctoparasite, the Northern fowl mite (Ornithonyssus sylviarum) International J. Parasitology 39:789-799.

Muir, W.M., G. K. Wong, Y. Zhang, J. Wang, M.A.M. Groenen, R.P.M.A. Crooijmans, H.-J. Megens, H. Zhang, R. Okimoto, A. Vereijken, A. Jungerius, G.A.A. Albers, C. Taylor Lawley, M. E. Delany, S. MacEachern, and H. H. Cheng. 2008. Genome-wide assessment of worldwide chicken SNP genetic diversity indicates significant absence of rare alleles in commercial breeds. 2008. Proceedings of the National Academy of Sciences (USA). 105:17312-17317.

Owen, J., M.E. Delany, and B.A. Mullens. 2008. Haplotype involvement in avian resistance to an ectoparasite. Immunogenetics 60:621-631.

Muir, W.M., Wong, G.K., Zhang, Y., Wang, J., Groenen, M.A.M., Crooijmans, R.P.M.A., Megens, H.-J., Zhang, H.M., McKay, J.C., McLeod, S., Okimoto, R., Fulton, J.E., Settar, P., O’Sullivan, N.P., Vereijken, A., Jungerius-Rattink, A., Albers, G.A.A., Taylor Lawley, C., Delany, M.E., and H.H. Cheng. 2008. Review of the initial validation and characterization of a 3K chicken SNP array. World’s Poultry Science J. 64:219-225.

Delany, M.E., L.M. Daniels, T.M. Gessaro, and K.L. Rodrigue. 2007. Chromosomal mapping of chicken mega-telomere arrays to GGA9, 16, 28 and W using a cytogenomic approach. Cytogenetic and Genome Research 117:54-63.

van de Lavoir M.-C., Diamond, J.H., Leighton, P.A., Mather-Love, C., Heyer, B.S., Bradshaw, R., Kerchner, A., Hooi, L.T., Gessaro, T., Swanberg, S.E., Delany,M.E., and Etches, R.J. 2006. Germline transmission of genetically modified primordial germ cells. Nature 441: 766-769.

Chang, H., and M.E. Delany. 2006. Complicated RNA splicing of chicken telomerase reverse transcriptase revealed by profiling cells both positive and negative for telomerase activity. Gene 379:33-39.

van de Lavoir, M.-C., Mather-Love, C., Leighton, P., Diamond, J.H., Heyer, B.S., Roberts, R., Zhu, L., Winters-Digiacinto, P., Kerchner, A., Gessaro, T., Swanberg, S., Delany, M.E., and R.J. Etches. 2006. High-grade transgenic somatic chimeras from chicken embryonic stem cells. Mechanisms of Development 123:31-41.

Swanberg, S.E. and M.E. Delany. 2006. Telomeres in aging: Birds. In Handbook of Models for Human Aging (editor: M. Conn), Chapter 29, p. 339-349. Academic Press (Elsevier, Inc.). Burlington MA (USA).

Delany, M.E. 2006. Avian genetic stocks: the high and low points from an academia researcher. Poultry Science 85:223-226.

O’Hare, T.H., and M.E. Delany. 2005. Telomerase gene expression in the chicken: telomerase RNA (TR) and reverse transcriptase (TERT) transcript profiles are tissue-specific and correlated with telomerase activity. AGE 27:257-266.

Rodrigue, K.L., May, B.P., Famula, T.R., and M.E. Delany. 2005. Meiotic instability of chicken ultra-long telomeres and mapping of a 2.8 megabase array to the W-sex chromosome. Chromosome Research 13:581-591.

Swanberg, S.E., and M.E. Delany. 2005. Differential expression of genes associated with telomere length homeostasis and oncogenesis in an avian model. Mechanisms of Aging and Development 126:1060-1070.

Schmid, M., Nanda, I., Hoehn, H., Schartl, M., Haaf, T., Buerstedde, J.-M., Arakawa, H., Caldwell, R.B., Weigend, S., Burt, D.W., Smith, J., Griffin, D.K., Masabanda, J., Groenen, M.A.M., Crooijmans, R.P.M.A., Vignal, A., Fillon, V., Morisson, M., Pitel, F., Vignoles, M., Garrigues, A., Gellin, J., Rodionov, A.V., Galkina, S.A., Lukina, N.A., Ben-Ari, G., Blum, S., Hillel, J., Twito, T., Lavi, U., David, L., Feldman, M.W., Delany, M.E., Conley, C.C., Fowler, V.M., Hedges, S.B., Godbout, R., Katyal, S., Smith, C., Hudson, Q., Sinclair, A., and Mizuno, S. 2005. Second report on chicken genes and chromosomes. Cytogenetic and Genome Research 109:415-479.

Romanov, M.N., L.M. Daniels, J.B. Dodgson and M.E. Delany. 2005. Integration of the cytogenetic and physical maps of chicken chromosome 17. Chromosome Research 13:215-222.

International Chicken Genome Sequencing Consortium. 2004. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. Nature 432:695-716. (cover art) Nature 432 2004.pdf

Delany, M.E., and L.M. Daniels. 2004. The chicken telomerase reverse transcriptase (chTERT): Molecular and cytogenetic characterization with a comparative analysis. Gene 339:61-69. DelanyDaniels Gene v339 p61-69.pdf

Swanberg, S.E., W. Payne, H.H. Hunt, J.B. Dodgson and M.E. Delany. 2004. Telomerase Activity and Differential Expression of Telomerase Genes and c-myc in Chicken Cells in vitro. Developmental Dynamics 231:14-21. Swanberg et al 2004 DevDyn 231 14-21.pdf

Delany, M.E. 2004. Genetic Variants for Chick Biology Research: From Breeds to Mutants. Mechanisms of Development 121(9):1169-1177. Delany MOD 121 1169-1177 2004.pdf

Chang, H., and M.E. Delany. 2004. Karyotype stability of the DT40 cell B cell line: Macrochromosome variation and cytogenetic mosaicism. Chromosome Research 12:299-307. Chang Delany DT40 Chrom Res v12 p299 04.pdf

Ernst, R.A., Bradley, F.B., M.E. Delany., U.K. Abbott, and R.M. Craig. 2004. Common incubation problems: Causes and remedies. University of California, Division of Agriculture and Natural Resources. ANR Publication 8127, 6 p.http://anrcatalog.ucdavis.edu/pdf/8127.pdf

Delany, M.E., and L.M. Daniels. 2003. The chicken telomerase RNA gene: Conservation of sequence, regulatory elements and synteny among viral, avian and mammalian genomes. Cytogenetic and Genome Research 10:309-317.

Swanberg, S.E., and M.E. Delany. 2003. Dynamics of telomere erosion in transformed and non-transformed avian cells in vitro. Cytogenetic and Genome Research 102:318-325.

Fulton, J.E. and M.E. Delany. 2003. Poultry Genetic Research Resources: Operation Rescue Needed. Science 300:1667-1668. Summary Full Text

Daniels, L.M., and M.E. Delany. 2003. Molecular and cytogenetic organization of the 5S ribosomal DNA in chicken (Gallus gallus). Chromosome Research 11:305-317.

Delany, M.E., L.M. Daniels, S.E. Swanberg, and H.A. Taylor. 2003. Telomeres in the chicken: Chromosome ends and genome stability. Poultry Science 82:917-926.

Delany, M.E.2003. Genetic diversity and conservation of poultry. In Poultry Genetics, Breeding and Biotechnology (editors: W.E. Muir and S.E. Aggrey). CABI Publishing, Wallingford, UK.

Taylor, H.A. and M.E. Delany. 2000. Ontogeny of telomerase in chicken: Impact of down-regulation on pre-and postnatal telomere length in vivo. Development, Growth and Differentiation 42:613-621.

Schmid, M. I. Nanda, M. Guttenbach, C. Steinlein, H. Hoehn, M. Schartl, T. Haaf, S. Weigend, R. Fries, J-M. Buerstedde, K. Wimmers, D.W. Burt, J. Smith, S. A’Hara, A. Law, D.K. Griffin, N. Bumstead, J. Kaufman, P.A. Thomson, T.A. Burke, M.A.M. Groenen, R.P.M.A. Crooijmans, A. Vignal, V. Fillion, M. Morisson, F. Pitel, M. Tixier-Boichard, K. Ladjali-Mohammedi, J. Hillel, A. Mäki-Tanila, H.H. Cheng, M.E. Delany., J. Burnside, S. Mizuno. 2000. First report on chicken genes and chromosomes. Cytogenetics and Cell Genetics 90:169-218.

Delany, M.E., A.B. Krupkin, and M.M. Miller. 2000. Organization of telomere sequences in birds: Evidence for arrays of extreme length and for in-vivo shortening in. Cytogenetics and Cell Genetics 90:139-145.

Delany, M.E.2000. Patterns of ribosomal gene variation in elite commercial chicken pure line populations. Animal Genetics 31:110-116.

Pisenti, J.M., M.E. Delany., R.L. Taylor, Jr., U.K. Abbott, H. Abplanalp, J.A. Arthur, M.R. Bakst, C. Baxter-Jones, J.J. Bitgood, F. Bradley, K.M. Cheng, R.R. Dietert, J.B. Dodgson, A. Donoghue, A.E. Emsley, R. Etches, R.R. Frahm, R.J. Gerrits, P.F. Goetinck, A.A. Grunder, D.E. Harry, S.J. Lamont, G.R. Martin, P.E. McGuire, G.P. Moberg, L.J. Pierro, C.O. Qualset, M. Qureshi, F. Schultz, and B.W. Wilson. 1999. Avian Genetic Resources at Risk: An assessment and proposal for conservation of genetic stocks in the USA and Canada. Report No. 20, University of California, Division of Agriculture and Natural Resources, Genetic Resources Conservation Program, Davis, CA.

Delany, M.E., L.A. Tell, J.R. Millam, and D.A. Preisler. 1999. Orange-winged Amazon parrot (Amazona amazonica) embryo development: Photographic candling analysis of artificially-incubated eggs. J. Avian Medicine and Surgery 13:116-123.

Delany, M.E., and A.B. Krupkin. 1999. Molecular characterization of ribosomal gene variation within and among NORs segregating in specialized populations of chicken. Genome 42:60-71.

Su, M., and M.E. Delany. 1998. Ribosomal RNA gene copy number variation in directionally selected enhanced-growth lines of chicken. Poultry Science 77:1748-1754.

Delany, M.E., and J.M. Pisenti. 1998. Conservation of avian genetic research resources: past, present and future. Poultry and Avian Biology Reviews 9:25-42.

Bradley, F.B., and M. E. Delany. 1997. The australian emu: embryonic development. University of California Division of Agriculture and Natural Resources Publication no. 21550.

Delany, M.E., R.L. Taylor, Jr., and S.E. Blom. 1995. Teratogenic development in chicken embryos associated with a major deletion in the rRNA gene cluster. Development, Growth and Differentiation 37:403-412.

Delany, M.E., A. Emsley, M. Smiley, J.R. Putnam, and S.E. Bloom. 1994. Nucleolar size polymorphisms in commercial layer chickens: determination of incidence, inheritance, and nucleolar sizes. Poultry Science 73:1211-1217.

Delany, M.E., D.E. Muscarella, and S.E. Bloom. 1994. Effects of rRNA gene copy number and nucleolar variation on early development: inhibition of gastrulation in rDNA-deficient chick embryos. J. Heredity 85:211-217.

Bloom, S.E., M.E. Delany., and D.E. Muscarella. 1993. Constant and variable features of avian chromosomes. In: Manipulation of the Avian Genome. A. Verrinder-Gibbins and R.J. Etches (Eds.), CRC Press, Inc., Boca Raton, FL.

Delany, M.E., R.R. Dietert, and S.E. Bloom. 1992. The effects of MHC chromosome dosage on bursal B-cell subpopulations in embryonic and neonatal chickens. Develop. Comp. Immunol. 16:313-327.

Delany, M.E., D.E. Muscarella, and S.E. Bloom. 1991. Formation of nucleolar polymorphisms in trisomic chickens and subsequent microevolution of rRNA gene clusters in diploids. J. Heredity 82:213-220.

Delany, M.E., R.R. Dietert, and S.E. Bloom. 1988. MHC-chromosome dosage effects: evidence for increased expression and alteration of B cell subpopulations in neonatal aneuploid chickens. Immunogenetics 27:24-30.

Bloom, S.E., M.E. Delany., D.E. Muscarella, R.R. Dietert, W.E. Briles, and R.W. Briles. 1988. Gene expression in chickens aneuploid for the MHC-bearing chromosome. In: The Molecular Biology of the MHC of Domestic Animal Species. (C.M. Warner, M.F. Rothschild, S.J. Lamont, Eds.), Iowa State University Press, Ames, p. 3-21.

Bloom, S.E., W.E. Briles, R.W. Briles, M.E. Delany., and R.R. Dietert. 1987. Chromosomal localization of the major histocompatibility (B) complex (MHC) and its expression in chickens aneuploid for the MHC/rDNA microchromosomes. Poultry Science 66:776-789.

Delany, M.E., W.E. Briles, R.W. Briles, E.M. Willand, R.R. Dietert, and S.E. Bloom. 1987. Cellular expression of MHC glycoproteins on erythrocytes from normal and aneuploid chickens. Develop. Comp. Immunol. 11:613-625.

Delany, M.E., and S.E. Bloom. 1984. Replication banding patterns in the chromosomes of the rainbow trout. J. Heredity 75:431-434.

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